Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 AC243591.1-201ENST00000452967 1364 ntBASIC20.59■□□□□ 0.89
ATP2A1O14983 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 CROCCP3-202ENST00000420820 1947 ntBASIC20.59■□□□□ 0.89
ATP2A1O14983 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2A1O14983 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2A1O14983 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2A1O14983 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2A1O14983 MIR574-201ENST00000385209 96 ntBASIC20.59■□□□□ 0.89
ATP2A1O14983 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2A1O14983 AC096633.1-201ENST00000422446 749 ntBASIC20.59■□□□□ 0.89
ATP2A1O14983 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2A1O14983 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP2A1O14983 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.59■□□□□ 0.89
ATP2A1O14983 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP2A1O14983 AC139887.3-201ENST00000568585 713 ntBASIC20.59■□□□□ 0.89
ATP2A1O14983 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 AC073592.3-201ENST00000625118 1834 ntBASIC20.59■□□□□ 0.89
ATP2A1O14983 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP2A1O14983 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A1O14983 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2A1O14983 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2A1O14983 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2A1O14983 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A1O14983 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A1O14983 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A1O14983 AC093010.1-201ENST00000473625 1624 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2A1O14983 FAM220CP-201ENST00000395253 831 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ATP2A1O14983 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A1O14983 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A1O14983 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A1O14983 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2A1O14983 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2A1O14983 SLC25A1P1-201ENST00000528351 927 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 AC021087.4-201ENST00000563761 564 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2A1O14983 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2A1O14983 AL049840.3-201ENST00000602669 611 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2A1O14983 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2A1O14983 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP2A1O14983 AP000867.4-201ENST00000641616 219 ntBASIC20.58■□□□□ 0.89
ATP2A1O14983 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A1O14983 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ATP2A1O14983 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.58■□□□□ 0.88
ATP2A1O14983 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.58■□□□□ 0.88
ATP2A1O14983 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
ATP2A1O14983 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATP2A1O14983 AC126763.1-201ENST00000552015 2118 ntBASIC20.57■□□□□ 0.88
ATP2A1O14983 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATP2A1O14983 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATP2A1O14983 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 RPS2P28-201ENST00000314255 741 ntBASIC20.57■□□□□ 0.88
ATP2A1O14983 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATP2A1O14983 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 AC007967.3-201ENST00000434308 558 ntBASIC20.57■□□□□ 0.88
ATP2A1O14983 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 SART3-203ENST00000546611 1184 ntBASIC20.57■□□□□ 0.88
ATP2A1O14983 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.57■□□□□ 0.88
ATP2A1O14983 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ATP2A1O14983 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ATP2A1O14983 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2A1O14983 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ATP2A1O14983 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATP2A1O14983 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ATP2A1O14983 DUTP2-201ENST00000519164 463 ntBASIC20.56■□□□□ 0.88
ATP2A1O14983 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP2A1O14983 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms