Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH17O14917 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH17O14917 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 AC135776.1-201ENST00000319817 2481 ntBASIC17.24■□□□□ 0.35
PCDH17O14917 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH17O14917 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH17O14917 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH17O14917 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
PCDH17O14917 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH17O14917 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH17O14917 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH17O14917 DUSP5P1-201ENST00000441325 1139 ntBASIC17.23■□□□□ 0.35
PCDH17O14917 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH17O14917 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH17O14917 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH17O14917 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH17O14917 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH17O14917 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDH17O14917 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH17O14917 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDH17O14917 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH17O14917 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH17O14917 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH17O14917 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDH17O14917 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDH17O14917 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH17O14917 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH17O14917 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDH17O14917 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH17O14917 HCG4P8-203ENST00000443049 980 ntBASIC17.22■□□□□ 0.35
PCDH17O14917 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDH17O14917 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDH17O14917 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDH17O14917 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDH17O14917 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PCDH17O14917 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDH17O14917 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH17O14917 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH17O14917 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDH17O14917 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH17O14917 AL163051.1-201ENST00000569214 1512 ntBASIC17.21■□□□□ 0.35
PCDH17O14917 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH17O14917 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDH17O14917 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH17O14917 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH17O14917 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH17O14917 MIR149-201ENST00000384879 89 ntBASIC17.21■□□□□ 0.35
PCDH17O14917 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDH17O14917 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDH17O14917 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms