Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.85■□□□□ 0.45
TLR4O00206 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TLR4O00206 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.85■□□□□ 0.45
TLR4O00206 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 MTCL1P1-201ENST00000446207 792 ntBASIC17.85■□□□□ 0.45
TLR4O00206 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.85■□□□□ 0.45
TLR4O00206 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TLR4O00206 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 AC009533.2-201ENST00000543664 586 ntBASIC17.85■□□□□ 0.45
TLR4O00206 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.85■□□□□ 0.45
TLR4O00206 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.85■□□□□ 0.45
TLR4O00206 AC023511.2-201ENST00000618803 211 ntBASIC17.85■□□□□ 0.45
TLR4O00206 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.85■□□□□ 0.45
TLR4O00206 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TLR4O00206 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TLR4O00206 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.85■□□□□ 0.45
TLR4O00206 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TLR4O00206 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 LINC00602-201ENST00000629776 2065 ntBASIC17.84■□□□□ 0.45
TLR4O00206 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TLR4O00206 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TLR4O00206 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 IL9RP2-201ENST00000423948 1312 ntBASIC17.84■□□□□ 0.45
TLR4O00206 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.84■□□□□ 0.45
TLR4O00206 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 AL031284.1-201ENST00000419297 478 ntBASIC17.84■□□□□ 0.45
TLR4O00206 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.84■□□□□ 0.45
TLR4O00206 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.84■□□□□ 0.45
TLR4O00206 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.84■□□□□ 0.45
TLR4O00206 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.84■□□□□ 0.45
TLR4O00206 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TLR4O00206 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
TLR4O00206 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.84■□□□□ 0.45
TLR4O00206 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.84■□□□□ 0.45
TLR4O00206 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.84■□□□□ 0.45
TLR4O00206 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TLR4O00206 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TLR4O00206 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.83■□□□□ 0.45
TLR4O00206 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TLR4O00206 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TLR4O00206 AL499627.1-201ENST00000569373 2188 ntBASIC17.83■□□□□ 0.45
TLR4O00206 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TLR4O00206 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TLR4O00206 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.83■□□□□ 0.44
TLR4O00206 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TLR4O00206 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TLR4O00206 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TLR4O00206 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TLR4O00206 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TLR4O00206 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TLR4O00206 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.83■□□□□ 0.44
TLR4O00206 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.83■□□□□ 0.44
TLR4O00206 AL355877.3-201ENST00000622820 899 ntBASIC17.83■□□□□ 0.44
TLR4O00206 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TLR4O00206 AF228730.7-201ENST00000641842 219 ntBASIC17.83■□□□□ 0.44
TLR4O00206 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TLR4O00206 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TLR4O00206 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms