Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MBD3L5A6NJ08 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 AC093677.2-201ENST00000600169 1863 ntBASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 HNRNPDP1-201ENST00000439535 754 ntBASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 AC139887.3-201ENST00000568585 713 ntBASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MBD3L5A6NJ08 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 AC243591.1-201ENST00000452967 1364 ntBASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 AC103564.2-201ENST00000432853 1299 ntBASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 GPALPP1-207ENST00000611650 899 ntBASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MBD3L5A6NJ08 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms