Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 REXO1L11P-201ENST00000620964 1927 ntBASIC19.17■□□□□ 0.66
RCCD1A6NED2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 AL158047.1-201ENST00000445918 881 ntBASIC19.17■□□□□ 0.66
RCCD1A6NED2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 SEC1P-202ENST00000473944 940 ntBASIC19.17■□□□□ 0.66
RCCD1A6NED2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCCD1A6NED2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
RCCD1A6NED2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 INGX-201ENST00000359239 846 ntBASIC19.16■□□□□ 0.66
RCCD1A6NED2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.16■□□□□ 0.66
RCCD1A6NED2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCCD1A6NED2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RCCD1A6NED2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 UBE2SP1-201ENST00000450587 669 ntBASIC19.15■□□□□ 0.66
RCCD1A6NED2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.15■□□□□ 0.66
RCCD1A6NED2 AP000525.1-201ENST00000608286 694 ntBASIC19.15■□□□□ 0.66
RCCD1A6NED2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
RCCD1A6NED2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RCCD1A6NED2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.15■□□□□ 0.66
RCCD1A6NED2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCCD1A6NED2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RCCD1A6NED2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RCCD1A6NED2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RCCD1A6NED2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.14■□□□□ 0.66
RCCD1A6NED2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCCD1A6NED2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms