Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SBNO1A3KN83 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 AC132938.6-201ENST00000623828 1655 ntBASIC24.29■■□□□ 1.48
SBNO1A3KN83 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 PNMT-202ENST00000394246 821 ntTSL 2 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 CRYGEP-201ENST00000412192 528 ntBASIC24.29■■□□□ 1.48
SBNO1A3KN83 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 ARTN-206ENST00000472435 402 ntTSL 3 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 AP002472.1-201ENST00000577490 586 ntBASIC24.29■■□□□ 1.48
SBNO1A3KN83 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SBNO1A3KN83 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.29■■□□□ 1.48
SBNO1A3KN83 ELL2P1-201ENST00000413990 1906 ntBASIC24.28■■□□□ 1.48
SBNO1A3KN83 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SBNO1A3KN83 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SBNO1A3KN83 AL513190.1-201ENST00000621254 727 ntBASIC24.28■■□□□ 1.48
SBNO1A3KN83 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 FAM8A3P-201ENST00000427218 844 ntBASIC24.27■■□□□ 1.48
SBNO1A3KN83 VN2R19P-201ENST00000442399 1052 ntBASIC24.27■■□□□ 1.48
SBNO1A3KN83 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 AC027612.4-201ENST00000605371 583 ntBASIC24.27■■□□□ 1.48
SBNO1A3KN83 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC24.27■■□□□ 1.48
SBNO1A3KN83 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SBNO1A3KN83 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 AC006504.4-201ENST00000592118 1568 ntBASIC24.26■■□□□ 1.47
SBNO1A3KN83 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms