Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 PRORSD1P-201ENST00000295112 541 ntBASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 SLC25A1P2-201ENST00000430693 912 ntBASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC009065.1-201ENST00000564055 1225 ntBASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL023803.3-201ENST00000615559 522 ntBASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 TSPY17P-201ENST00000450329 467 ntBASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 TSPY20P-201ENST00000450910 630 ntBASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 AP003041.3-201ENST00000527151 707 ntBASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL353719.1-201ENST00000566847 864 ntBASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 CR769767.2-201ENST00000622735 460 ntBASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 LINC01126-201ENST00000623515 1646 ntBASIC15.1■□□□□ 0.01
TRBV6-7A0A0A0MS04 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC098590.1-201ENST00000468126 897 ntBASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 MIR3180-4-201ENST00000582223 153 ntBASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC026471.5-201ENST00000615068 467 ntBASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV6-7A0A0A0MS04 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms