Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 AL136038.4-201ENST00000603606 1261 ntBASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNE3Q9Y6H6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 AC104076.2-201ENST00000448912 469 ntBASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 DUTP2-201ENST00000519164 463 ntBASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNE3Q9Y6H6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 STARP1-201ENST00000397973 869 ntBASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 AC024563.2-201ENST00000603282 481 ntBASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 LINC01023-201ENST00000606054 436 ntBASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KCNE3Q9Y6H6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.77■□□□□ 0.27
KCNE3Q9Y6H6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms