Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.27■□□□□ 0.51
RAI2Q9Y5P3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAI2Q9Y5P3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI2Q9Y5P3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 TSPY12P-201ENST00000421279 868 ntBASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ATP5G2P1-201ENST00000433580 426 ntBASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 AL390961.4-201ENST00000623958 2535 ntBASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI2Q9Y5P3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 KRT8P26-201ENST00000534154 1276 ntBASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI2Q9Y5P3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.23■□□□□ 0.51
RAI2Q9Y5P3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms