Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 AC073621.1-201ENST00000392730 636 ntBASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 KRT18P27-201ENST00000427733 1299 ntBASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 PHGDH-209ENST00000641074 1780 ntBASIC21.36■■□□□ 1.01
PCDHAC2Q9Y5I4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 AC097374.2-201ENST00000618617 1306 ntBASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 LAGE3P1-201ENST00000425356 484 ntBASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 KRT18P2-201ENST00000447938 1258 ntBASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 AD001527.2-201ENST00000622994 785 ntBASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHAC2Q9Y5I4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 AL031598.1-201ENST00000561511 1773 ntBASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 AC096633.1-201ENST00000422446 749 ntBASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 AP001160.2-201ENST00000596071 487 ntBASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHAC2Q9Y5I4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms