Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 LINC00167-201ENST00000530583 1419 ntBASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 NAPSB-206ENST00000562112 1266 ntBASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 MIR4497-201ENST00000583208 89 ntBASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 AC008687.5-201ENST00000593746 558 ntBASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 FAM87A-204ENST00000613235 858 ntBASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AC022898.2-201ENST00000616822 1312 ntBASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AC092865.7-201ENST00000641832 219 ntBASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 PCDHA12-202ENST00000613593 2588 ntBASIC18.86■□□□□ 0.61
PCDHA3Q9Y5H8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 MMP23A-201ENST00000234610 1017 ntBASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 HMGA1P5-201ENST00000412453 271 ntBASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 PVRIG2P-201ENST00000435460 978 ntBASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 ECEL1P2-202ENST00000465689 757 ntBASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA3Q9Y5H8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms