Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 AC083906.6-201ENST00000641366 219 ntBASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 KRT17P6-201ENST00000453795 1220 ntBASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA6Q9Y5G7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 AC012615.1-201ENST00000565797 1299 ntBASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 AC090616.6-201ENST00000582640 721 ntBASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGA6Q9Y5G7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.39■□□□□ 0.38
PCDHGA6Q9Y5G7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA6Q9Y5G7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDHGA6Q9Y5G7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA6Q9Y5G7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGA6Q9Y5G7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms