Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 MIR3917-201ENST00000580971 93 ntBASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB6Q9Y5F9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 HLA-F-220ENST00000434407 884 ntBASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 HCG4P8-203ENST00000443049 980 ntBASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 ABALON-201ENST00000629058 1903 ntBASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB6Q9Y5F9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 AC092597.1-201ENST00000487352 616 ntBASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 MIR3180-4-201ENST00000582223 153 ntBASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB6Q9Y5F9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms