Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 HOXB1-202ENST00000577092 1414 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 NOC2LP1-202ENST00000452600 2235 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 IGHGP-201ENST00000390555 1178 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 AL031284.1-201ENST00000419297 478 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 RN7SL606P-201ENST00000472779 293 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 POLD2P1-201ENST00000511220 997 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 AP005901.3-202ENST00000581653 237 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 WIZP1-201ENST00000531444 2299 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 AL109659.2-201ENST00000606809 1674 ntBASIC19.46■□□□□ 0.71
USP15Q9Y4E8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP15Q9Y4E8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 BICD1-207ENST00000551848 1962 ntBASIC19.45■□□□□ 0.7
USP15Q9Y4E8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 AL354751.1-201ENST00000412768 1863 ntBASIC19.45■□□□□ 0.7
USP15Q9Y4E8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP15Q9Y4E8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 KRT18P67-201ENST00000432816 1264 ntBASIC19.44■□□□□ 0.7
USP15Q9Y4E8 AC091607.1-201ENST00000490318 1060 ntBASIC19.44■□□□□ 0.7
USP15Q9Y4E8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 RCC2P3-201ENST00000418112 1537 ntBASIC19.44■□□□□ 0.7
USP15Q9Y4E8 AC138932.1-201ENST00000534164 6830 ntBASIC19.44■□□□□ 0.7
USP15Q9Y4E8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 AC008556.1-201ENST00000610908 2040 ntBASIC19.44■□□□□ 0.7
USP15Q9Y4E8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP15Q9Y4E8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 FAM220CP-201ENST00000395253 831 ntBASIC19.43■□□□□ 0.7
USP15Q9Y4E8 MINOS1P3-201ENST00000457048 203 ntBASIC19.43■□□□□ 0.7
USP15Q9Y4E8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.43■□□□□ 0.7
USP15Q9Y4E8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP15Q9Y4E8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms