Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.7■□□□□ 0.91
R3HCC1Q9Y3T6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 RBM17P1-201ENST00000453646 1190 ntBASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 AC091390.4-202ENST00000476426 537 ntBASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 AC097488.1-201ENST00000507834 756 ntBASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HCC1Q9Y3T6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HCC1Q9Y3T6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 AL596257.1-201ENST00000641463 2694 ntBASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 CRYGFP-201ENST00000418459 633 ntBASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 AP000692.2-201ENST00000608391 879 ntBASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 SDHAP1-207ENST00000440850 2000 ntBASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HCC1Q9Y3T6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 MIR1238-201ENST00000408483 83 ntBASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.67■□□□□ 0.9
R3HCC1Q9Y3T6 AP000525.1-201ENST00000608286 694 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms