Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF11Q9Y3C5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 AC093010.1-201ENST00000473625 1624 ntBASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 AC012317.2-201ENST00000623305 2251 ntBASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 SLC25A6P5-201ENST00000435663 894 ntBASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 AL512604.3-201ENST00000569583 964 ntBASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF11Q9Y3C5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms