Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH1Q9Y2L9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 AC100791.3-201ENST00000617619 330 ntBASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 AC010980.2-201ENST00000587099 1412 ntBASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 RCC2P6-201ENST00000526625 1557 ntBASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH1Q9Y2L9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 MIPEPP3-201ENST00000412105 444 ntBASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 AC092118.2-201ENST00000613495 667 ntBASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 AC068587.9-201ENST00000641814 219 ntBASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 HYMAI-201ENST00000635591 3347 ntBASIC17.18■□□□□ 0.34
LRCH1Q9Y2L9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 AL355312.1-201ENST00000407115 2176 ntBASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms