Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 AKR1C7P-201ENST00000305623 895 ntBASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 AP000347.1-202ENST00000435868 847 ntBASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX2IPQ9Y2D8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 TSPY12P-201ENST00000421279 868 ntBASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 AC079776.4-201ENST00000511039 504 ntBASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 MIR5100-201ENST00000579544 119 ntBASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 AC112777.1-201ENST00000540175 1423 ntBASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX2IPQ9Y2D8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSX2IPQ9Y2D8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.39■□□□□ 0.7
SSX2IPQ9Y2D8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 AC091607.1-201ENST00000490318 1060 ntBASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX2IPQ9Y2D8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms