Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 AC112482.1-201ENST00000492080 688 ntBASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDK11AQ9UQ88 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 AP001160.2-201ENST00000596071 487 ntBASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 AC010460.3-201ENST00000511359 1579 ntBASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDK11AQ9UQ88 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CDK11AQ9UQ88 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.76■■■□□ 2.04
CDK11AQ9UQ88 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 BEX3-201ENST00000361298 921 ntTSL 2 BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 AC002347.1-201ENST00000569543 541 ntBASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CDK11AQ9UQ88 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 AC073621.1-201ENST00000392730 636 ntBASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 AC007967.2-201ENST00000432613 625 ntBASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 AC103564.2-201ENST00000432853 1299 ntBASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 DHDH-204ENST00000523250 634 ntTSL 5 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 AC005593.1-201ENST00000624894 515 ntBASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 AC079781.4-201ENST00000641908 219 ntBASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDK11AQ9UQ88 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 GGCT-205ENST00000409436 954 ntTSL 3 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 SPDYE21P-201ENST00000413323 827 ntBASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 ESPNP-201ENST00000270691 2015 ntBASIC27.74■■■□□ 2.03
CDK11AQ9UQ88 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC27.73■■■□□ 2.03
CDK11AQ9UQ88 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms