Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 AC006116.8-202ENST00000587620 1550 ntBASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPSNAP3AQ9UFN0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPSNAP3AQ9UFN0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.27■□□□□ 0.35
NIPSNAP3AQ9UFN0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NIPSNAP3AQ9UFN0 AL645608.8-201ENST00000606034 2086 ntBASIC17.27■□□□□ 0.35
NIPSNAP3AQ9UFN0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.27■□□□□ 0.35
NIPSNAP3AQ9UFN0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.27■□□□□ 0.35
NIPSNAP3AQ9UFN0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NIPSNAP3AQ9UFN0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 AC093010.1-201ENST00000473625 1624 ntBASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 AC097488.1-201ENST00000507834 756 ntBASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 AL135905.2-201ENST00000584934 1404 ntBASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPSNAP3AQ9UFN0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NIPSNAP3AQ9UFN0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms