Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CTSFQ9UBX1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTSFQ9UBX1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTSFQ9UBX1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTSFQ9UBX1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 LTB4R2-202ENST00000528054 3092 ntBASIC16.95■□□□□ 0.3
CTSFQ9UBX1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSFQ9UBX1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.94■□□□□ 0.3
CTSFQ9UBX1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.94■□□□□ 0.3
CTSFQ9UBX1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms