Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 AP002469.2-201ENST00000531724 424 ntBASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 NSUN5P1-202ENST00000421140 1535 ntBASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 NSUN5P2-203ENST00000457352 1529 ntBASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 AC068880.1-201ENST00000507289 2297 ntBASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC6Q9UBN7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 AL163051.1-201ENST00000569214 1512 ntBASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 AL121912.1-201ENST00000603683 238 ntBASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC6Q9UBN7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HDAC6Q9UBN7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HDAC6Q9UBN7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
HDAC6Q9UBN7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HDAC6Q9UBN7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
HDAC6Q9UBN7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
HDAC6Q9UBN7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 SLC25A6P4-201ENST00000586535 553 ntBASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.39■□□□□ 0.85
HDAC6Q9UBN7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 AKR1C7P-201ENST00000305623 895 ntBASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 VENTXP7-201ENST00000475503 772 ntBASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 KRT18P41-201ENST00000518924 1277 ntBASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 AC004263.2-201ENST00000617183 678 ntBASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC6Q9UBN7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms