Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBP1Q9NZI7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 FLJ13224-201ENST00000313737 1514 ntBASIC18.41■□□□□ 0.54
UBP1Q9NZI7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 AC092647.4-201ENST00000457211 535 ntBASIC18.41■□□□□ 0.54
UBP1Q9NZI7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBP1Q9NZI7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 LINC00602-201ENST00000629776 2065 ntBASIC18.4■□□□□ 0.54
UBP1Q9NZI7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 AC112907.2-201ENST00000448639 330 ntBASIC18.4■□□□□ 0.54
UBP1Q9NZI7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBP1Q9NZI7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBP1Q9NZI7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
UBP1Q9NZI7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 PCDHB18P-201ENST00000524813 2368 ntBASIC18.39■□□□□ 0.53
UBP1Q9NZI7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.39■□□□□ 0.53
UBP1Q9NZI7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 HOMER2P1-201ENST00000455653 964 ntBASIC18.39■□□□□ 0.53
UBP1Q9NZI7 DUX4L26-201ENST00000489078 1255 ntBASIC18.39■□□□□ 0.53
UBP1Q9NZI7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 AC026471.1-201ENST00000564629 3026 ntBASIC18.39■□□□□ 0.53
UBP1Q9NZI7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBP1Q9NZI7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
UBP1Q9NZI7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms