Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRMT13Q9NUP7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AC116562.4-201ENST00000641316 2276 ntBASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AL022326.1-202ENST00000641533 845 ntBASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AC134684.3-201ENST00000641758 218 ntBASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRMT13Q9NUP7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 PMPCAP1-201ENST00000508114 1576 ntBASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 AL355385.1-201ENST00000606123 409 ntBASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 AC097374.2-201ENST00000618617 1306 ntBASIC19.72■□□□□ 0.75
TRMT13Q9NUP7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AC010460.3-201ENST00000511359 1579 ntBASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AC004832.2-201ENST00000426397 482 ntBASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AC002347.1-201ENST00000569543 541 ntBASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AC027796.2-201ENST00000575326 344 ntBASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 ANO7L1-203ENST00000602586 1720 ntBASIC19.71■□□□□ 0.75
TRMT13Q9NUP7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 GMCL1P1-201ENST00000463439 1581 ntBASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRMT13Q9NUP7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms