Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 AC022898.2-201ENST00000616822 1312 ntBASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN4Q9NRR5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 IGHGP-201ENST00000390555 1178 ntBASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 VENTXP5-201ENST00000523979 775 ntBASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 AC083849.1-201ENST00000615227 514 ntBASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 AL590326.2-201ENST00000625139 305 ntBASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN4Q9NRR5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms