Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 AC140113.3-201ENST00000605663 199 ntBASIC16.79■□□□□ 0.28
POLE3Q9NRF9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.79■□□□□ 0.28
POLE3Q9NRF9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLE3Q9NRF9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 AC113347.1-201ENST00000413321 391 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 COX11P1-201ENST00000489116 835 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 AC113404.2-201ENST00000507884 177 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 GCSHP2-201ENST00000560971 527 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 AC005363.2-201ENST00000618631 242 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 KRT18P55-202ENST00000578578 1546 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 KRT89P-201ENST00000620027 1478 ntBASIC16.78■□□□□ 0.28
POLE3Q9NRF9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLE3Q9NRF9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms