Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 AP000593.1-201ENST00000393668 712 ntBASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 AC092597.1-201ENST00000487352 616 ntBASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 AC009053.2-201ENST00000563701 2365 ntBASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 HYMAI.1-201ENST00000620949 238 ntBASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 OR6D1P-202ENST00000641007 5290 ntBASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.33■□□□□ 0.37
NECTIN3Q9NQS3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 AC087388.1-201ENST00000571370 1112 ntBASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 AC079602.3-201ENST00000623931 403 ntBASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NECTIN3Q9NQS3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 MYLKP1-201ENST00000509077 1580 ntBASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 ESPNP-201ENST00000270691 2015 ntBASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 AL031133.1-201ENST00000406807 723 ntBASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 AL671277.2-201ENST00000458060 996 ntBASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 AC099343.3-201ENST00000605834 2503 ntBASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 AC099398.1-201ENST00000567919 2776 ntBASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NECTIN3Q9NQS3 AL163051.1-201ENST00000569214 1512 ntBASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 MIR3180-4-201ENST00000582223 153 ntBASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NECTIN3Q9NQS3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms