Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NLRC4Q9NPP4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NLRC4Q9NPP4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC4Q9NPP4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 AC106820.2-201ENST00000563775 3264 ntBASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 OR6D1P-202ENST00000641007 5290 ntBASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 KRT18P55-202ENST00000578578 1546 ntBASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NLRC4Q9NPP4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.58■□□□□ 0.73
NLRC4Q9NPP4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 HMGA1P5-201ENST00000412453 271 ntBASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 AL596275.1-201ENST00000423464 877 ntBASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 AC132938.6-201ENST00000623828 1655 ntBASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC4Q9NPP4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms