Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC26.9■■□□□ 1.9
SCAF1Q9H7N4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC26.89■■□□□ 1.9
SCAF1Q9H7N4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SCAF1Q9H7N4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC26.89■■□□□ 1.9
SCAF1Q9H7N4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SCAF1Q9H7N4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SCAF1Q9H7N4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SCAF1Q9H7N4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
SCAF1Q9H7N4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 AC034232.1-201ENST00000506026 1064 ntBASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 AC004223.2-201ENST00000590309 544 ntBASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 AC055717.3-201ENST00000622967 595 ntBASIC26.89■■□□□ 1.89
SCAF1Q9H7N4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 AC018553.1-201ENST00000616682 1458 ntBASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 AC140113.2-201ENST00000604370 208 ntBASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.88■■□□□ 1.89
SCAF1Q9H7N4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 AC104819.1-201ENST00000504587 486 ntBASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 AC064862.7-201ENST00000604520 867 ntBASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF1Q9H7N4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF1Q9H7N4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms