Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 PHGDH-209ENST00000641074 1780 ntBASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPAP3Q9H6T3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 AC098831.1-202ENST00000438821 336 ntBASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 AC145285.3-201ENST00000564603 959 ntBASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 AC010460.3-201ENST00000511359 1579 ntBASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPAP3Q9H6T3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 AC093010.1-201ENST00000473625 1624 ntBASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 AC096633.1-201ENST00000422446 749 ntBASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 AC008735.5-201ENST00000623544 497 ntBASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 KRT8P47-201ENST00000604727 1398 ntBASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.69■□□□□ 0.9
RPAP3Q9H6T3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 CROCCP3-202ENST00000420820 1947 ntBASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.68■□□□□ 0.9
RPAP3Q9H6T3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.67■□□□□ 0.9
RPAP3Q9H6T3 BX005266.1-201ENST00000473402 457 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms