Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC007613.1-201ENST00000572811 2597 ntBASIC18.32■□□□□ 0.52
POLR1EQ9GZS1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 AC022898.2-201ENST00000616822 1312 ntBASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 PCED1CP-201ENST00000419887 785 ntBASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 TSPY22P-201ENST00000427496 604 ntBASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 AC009154.2-201ENST00000621177 724 ntBASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
POLR1EQ9GZS1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 AC116407.4-201ENST00000623319 1061 ntBASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1EQ9GZS1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
POLR1EQ9GZS1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms