Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAF4Q9BUZ4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 GCSHP2-201ENST00000560971 527 ntBASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRAF4Q9BUZ4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 STARP1-201ENST00000397973 869 ntBASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 AC112907.2-201ENST00000448639 330 ntBASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 CR769767.2-201ENST00000622735 460 ntBASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 AC005332.1-201ENST00000577698 1310 ntBASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 AC018695.7-201ENST00000624587 2492 ntBASIC16.16■□□□□ 0.18
TRAF4Q9BUZ4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 SDHAP1-207ENST00000440850 2000 ntBASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 ANO7L1-203ENST00000602586 1720 ntBASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF4Q9BUZ4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms