Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 KRT18P48-201ENST00000434763 852 ntBASIC12.59□□□□□ -0.39
UPK3BQ9BT76 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 BX276092.5-203ENST00000456199 560 ntBASIC12.59□□□□□ -0.39
UPK3BQ9BT76 KRT8P26-201ENST00000534154 1276 ntBASIC12.59□□□□□ -0.39
UPK3BQ9BT76 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UPK3BQ9BT76 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
UPK3BQ9BT76 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
UPK3BQ9BT76 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 AC024563.2-201ENST00000603282 481 ntBASIC12.58□□□□□ -0.4
UPK3BQ9BT76 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.58□□□□□ -0.4
UPK3BQ9BT76 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.58□□□□□ -0.4
UPK3BQ9BT76 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 AC009102.3-201ENST00000623118 1491 ntBASIC12.58□□□□□ -0.4
UPK3BQ9BT76 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK3BQ9BT76 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms