Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 STARP1-201ENST00000397973 869 ntBASIC15.96■□□□□ 0.15
VRK1Q99986 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
VRK1Q99986 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.96■□□□□ 0.15
VRK1Q99986 AC034232.1-201ENST00000506026 1064 ntBASIC15.96■□□□□ 0.15
VRK1Q99986 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.96■□□□□ 0.15
VRK1Q99986 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.96■□□□□ 0.15
VRK1Q99986 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.96■□□□□ 0.15
VRK1Q99986 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.96■□□□□ 0.15
VRK1Q99986 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK1Q99986 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VRK1Q99986 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
VRK1Q99986 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 LINC01311-201ENST00000565162 1445 ntBASIC15.95■□□□□ 0.14
VRK1Q99986 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
VRK1Q99986 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 VENTXP5-201ENST00000523979 775 ntBASIC15.95■□□□□ 0.14
VRK1Q99986 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.95■□□□□ 0.14
VRK1Q99986 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 IER3-202ENST00000376377 1350 ntBASIC15.95■□□□□ 0.14
VRK1Q99986 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
VRK1Q99986 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VRK1Q99986 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
VRK1Q99986 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.95■□□□□ 0.14
VRK1Q99986 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VRK1Q99986 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
VRK1Q99986 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VRK1Q99986 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.94■□□□□ 0.14
VRK1Q99986 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.94■□□□□ 0.14
VRK1Q99986 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VRK1Q99986 RCC2P3-201ENST00000418112 1537 ntBASIC15.94■□□□□ 0.14
VRK1Q99986 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 FEM1AP3-201ENST00000403722 1741 ntBASIC15.94■□□□□ 0.14
VRK1Q99986 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.94■□□□□ 0.14
VRK1Q99986 IRX1P1-201ENST00000438849 1838 ntBASIC15.94■□□□□ 0.14
VRK1Q99986 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
VRK1Q99986 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
VRK1Q99986 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.94■□□□□ 0.14
VRK1Q99986 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
VRK1Q99986 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
VRK1Q99986 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.94■□□□□ 0.14
VRK1Q99986 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.94■□□□□ 0.14
VRK1Q99986 FAM86EP-206ENST00000510506 987 ntBASIC15.94■□□□□ 0.14
VRK1Q99986 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.94■□□□□ 0.14
VRK1Q99986 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.94■□□□□ 0.14
VRK1Q99986 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.94■□□□□ 0.14
VRK1Q99986 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK1Q99986 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms