Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 AC100803.2-201ENST00000562459 1963 ntBASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 AC134043.2-201ENST00000624206 2238 ntBASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 IGHGP-201ENST00000390555 1178 ntBASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 AP003733.1-201ENST00000491725 852 ntBASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CSPG4P5Q96PW8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 AL671277.2-201ENST00000458060 996 ntBASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 LINC01238-205ENST00000567549 1107 ntBASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSPG4P5Q96PW8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 AC012317.2-201ENST00000623305 2251 ntBASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 KRT18P65-201ENST00000439811 1286 ntBASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 FAM210CP-201ENST00000445714 574 ntBASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CSPG4P5Q96PW8 GNAS-203ENST00000306120 1878 ntBASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 AC006116.8-202ENST00000587620 1550 ntBASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 AC022898.2-201ENST00000616822 1312 ntBASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSPG4P5Q96PW8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms