Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 MIR149-201ENST00000384879 89 ntBASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 AC145285.3-201ENST00000564603 959 ntBASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 INTS4P1-201ENST00000438455 1935 ntBASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 AC004408.2-201ENST00000623613 2777 ntBASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 PGAM5P1-201ENST00000518923 814 ntBASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 IGHV3-22-201ENST00000520721 359 ntBASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC46A1Q96NT5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 AP005117.1-201ENST00000584346 1413 ntBASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 MYLKP1-201ENST00000509077 1580 ntBASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 AC027601.4-201ENST00000611259 610 ntBASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SLC46A1Q96NT5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC46A1Q96NT5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SLC46A1Q96NT5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC46A1Q96NT5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC46A1Q96NT5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.21■□□□□ 0.34
SLC46A1Q96NT5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC46A1Q96NT5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms