Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX27Q96L92 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX27Q96L92 KRT16P4-201ENST00000453883 522 ntBASIC19.43■□□□□ 0.7
SNX27Q96L92 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX27Q96L92 DUTP2-201ENST00000519164 463 ntBASIC19.43■□□□□ 0.7
SNX27Q96L92 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SNX27Q96L92 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX27Q96L92 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SNX27Q96L92 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 AL020996.1-203ENST00000536896 2307 ntBASIC19.42■□□□□ 0.7
SNX27Q96L92 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX27Q96L92 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX27Q96L92 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX27Q96L92 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX27Q96L92 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.42■□□□□ 0.7
SNX27Q96L92 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX27Q96L92 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX27Q96L92 AC120114.3-201ENST00000611923 658 ntBASIC19.42■□□□□ 0.7
SNX27Q96L92 AL031008.1-201ENST00000619963 541 ntBASIC19.42■□□□□ 0.7
SNX27Q96L92 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX27Q96L92 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX27Q96L92 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX27Q96L92 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX27Q96L92 TP73-AS1-210ENST00000637775 1455 ntBASIC19.41■□□□□ 0.7
SNX27Q96L92 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNX27Q96L92 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SNX27Q96L92 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SNX27Q96L92 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SNX27Q96L92 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
SNX27Q96L92 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNX27Q96L92 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 EMBP1-201ENST00000458200 901 ntBASIC19.41■□□□□ 0.7
SNX27Q96L92 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.41■□□□□ 0.7
SNX27Q96L92 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.41■□□□□ 0.7
SNX27Q96L92 AL160237.2-201ENST00000556165 472 ntBASIC19.41■□□□□ 0.7
SNX27Q96L92 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX27Q96L92 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX27Q96L92 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SNX27Q96L92 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNX27Q96L92 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNX27Q96L92 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX27Q96L92 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX27Q96L92 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNX27Q96L92 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.41■□□□□ 0.7
SNX27Q96L92 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX27Q96L92 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX27Q96L92 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SNX27Q96L92 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SNX27Q96L92 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SNX27Q96L92 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms