Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 LIN28AP1-201ENST00000429574 405 ntBASIC19.12■□□□□ 0.65
TRIM11Q96F44 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 GCSHP2-201ENST00000560971 527 ntBASIC19.12■□□□□ 0.65
TRIM11Q96F44 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 KRT89P-201ENST00000620027 1478 ntBASIC19.11■□□□□ 0.65
TRIM11Q96F44 LINC00167-201ENST00000530583 1419 ntBASIC19.11■□□□□ 0.65
TRIM11Q96F44 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRIM11Q96F44 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM11Q96F44 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 ATP5G1P1-201ENST00000448724 379 ntBASIC19.1■□□□□ 0.65
TRIM11Q96F44 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 AC140113.3-201ENST00000605663 199 ntBASIC19.1■□□□□ 0.65
TRIM11Q96F44 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM11Q96F44 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM11Q96F44 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms