Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF31Q96EP0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF31Q96EP0 FZD10-202ENST00000539839 3282 ntBASIC17.43■□□□□ 0.38
RNF31Q96EP0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.42■□□□□ 0.38
RNF31Q96EP0 KRT8P7-201ENST00000533003 1432 ntBASIC17.42■□□□□ 0.38
RNF31Q96EP0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 AC004870.1-201ENST00000315132 882 ntBASIC17.42■□□□□ 0.38
RNF31Q96EP0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 DRAXINP1-201ENST00000437611 948 ntBASIC17.42■□□□□ 0.38
RNF31Q96EP0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF31Q96EP0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF31Q96EP0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 AC233702.3-201ENST00000578656 1387 ntBASIC17.41■□□□□ 0.38
RNF31Q96EP0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 AC079776.4-201ENST00000511039 504 ntBASIC17.41■□□□□ 0.38
RNF31Q96EP0 AC091304.2-201ENST00000564639 760 ntBASIC17.41■□□□□ 0.38
RNF31Q96EP0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.41■□□□□ 0.38
RNF31Q96EP0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF31Q96EP0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF31Q96EP0 AL353692.3-201ENST00000407031 1396 ntBASIC17.4■□□□□ 0.38
RNF31Q96EP0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF31Q96EP0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF31Q96EP0 KRT18P31-201ENST00000506277 1292 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms