Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTP4Q96DX8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RTP4Q96DX8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTP4Q96DX8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTP4Q96DX8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTP4Q96DX8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTP4Q96DX8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTP4Q96DX8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTP4Q96DX8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.41■□□□□ 0.54
RTP4Q96DX8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.41■□□□□ 0.54
RTP4Q96DX8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 AK4P3-201ENST00000418260 669 ntBASIC18.41■□□□□ 0.54
RTP4Q96DX8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.41■□□□□ 0.54
RTP4Q96DX8 RASA4DP-201ENST00000460726 1199 ntBASIC18.41■□□□□ 0.54
RTP4Q96DX8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.41■□□□□ 0.54
RTP4Q96DX8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.41■□□□□ 0.54
RTP4Q96DX8 AL645608.8-201ENST00000606034 2086 ntBASIC18.41■□□□□ 0.54
RTP4Q96DX8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
RTP4Q96DX8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTP4Q96DX8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.41■□□□□ 0.54
RTP4Q96DX8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 AC024563.2-201ENST00000603282 481 ntBASIC18.4■□□□□ 0.54
RTP4Q96DX8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 AC079602.3-201ENST00000623931 403 ntBASIC18.4■□□□□ 0.54
RTP4Q96DX8 AL023973.1-201ENST00000624619 620 ntBASIC18.4■□□□□ 0.54
RTP4Q96DX8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTP4Q96DX8 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.4■□□□□ 0.54
RTP4Q96DX8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
RTP4Q96DX8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
RTP4Q96DX8 PP12613-201ENST00000424958 2230 ntBASIC18.39■□□□□ 0.54
RTP4Q96DX8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTP4Q96DX8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTP4Q96DX8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RTP4Q96DX8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTP4Q96DX8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTP4Q96DX8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTP4Q96DX8 AC133963.1-201ENST00000504166 1679 ntBASIC18.39■□□□□ 0.53
RTP4Q96DX8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTP4Q96DX8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTP4Q96DX8 KRT18P65-201ENST00000439811 1286 ntBASIC18.39■□□□□ 0.53
RTP4Q96DX8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTP4Q96DX8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTP4Q96DX8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 AL355312.1-201ENST00000407115 2176 ntBASIC18.39■□□□□ 0.53
RTP4Q96DX8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.39■□□□□ 0.53
RTP4Q96DX8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTP4Q96DX8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms