Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
USP6NLQ92738 PMPCAP1-201ENST00000508114 1576 ntBASIC20.38■□□□□ 0.85
USP6NLQ92738 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.38■□□□□ 0.85
USP6NLQ92738 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.38■□□□□ 0.85
USP6NLQ92738 AC073621.1-201ENST00000392730 636 ntBASIC20.38■□□□□ 0.85
USP6NLQ92738 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.38■□□□□ 0.85
USP6NLQ92738 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.38■□□□□ 0.85
USP6NLQ92738 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.38■□□□□ 0.85
USP6NLQ92738 AC002347.1-201ENST00000569543 541 ntBASIC20.38■□□□□ 0.85
USP6NLQ92738 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.38■□□□□ 0.85
USP6NLQ92738 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.38■□□□□ 0.85
USP6NLQ92738 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6NLQ92738 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6NLQ92738 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 AC022898.2-201ENST00000616822 1312 ntBASIC20.37■□□□□ 0.85
USP6NLQ92738 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6NLQ92738 AC023274.1-201ENST00000418278 595 ntBASIC20.37■□□□□ 0.85
USP6NLQ92738 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.37■□□□□ 0.85
USP6NLQ92738 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6NLQ92738 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6NLQ92738 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.37■□□□□ 0.85
USP6NLQ92738 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
USP6NLQ92738 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.37■□□□□ 0.85
USP6NLQ92738 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6NLQ92738 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP6NLQ92738 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6NLQ92738 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6NLQ92738 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
USP6NLQ92738 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP6NLQ92738 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6NLQ92738 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.36■□□□□ 0.85
USP6NLQ92738 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.36■□□□□ 0.85
USP6NLQ92738 DNAJB3-202ENST00000449667 1266 ntBASIC20.36■□□□□ 0.85
USP6NLQ92738 BX005266.1-201ENST00000473402 457 ntBASIC20.36■□□□□ 0.85
USP6NLQ92738 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 MTDHP5-201ENST00000598980 586 ntBASIC20.36■□□□□ 0.85
USP6NLQ92738 AL022326.1-202ENST00000641533 845 ntBASIC20.36■□□□□ 0.85
USP6NLQ92738 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6NLQ92738 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
USP6NLQ92738 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6NLQ92738 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
USP6NLQ92738 AC116562.4-201ENST00000641316 2276 ntBASIC20.36■□□□□ 0.85
USP6NLQ92738 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6NLQ92738 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6NLQ92738 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
USP6NLQ92738 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
USP6NLQ92738 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP6NLQ92738 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.35■□□□□ 0.85
USP6NLQ92738 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6NLQ92738 PRYP5-201ENST00000451909 266 ntBASIC20.35■□□□□ 0.85
USP6NLQ92738 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.35■□□□□ 0.85
USP6NLQ92738 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
USP6NLQ92738 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms