Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPB3Q92617 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 LINC01126-201ENST00000623515 1646 ntBASIC14.27□□□□□ -0.12
NPIPB3Q92617 AC006116.8-202ENST00000587620 1550 ntBASIC14.27□□□□□ -0.12
NPIPB3Q92617 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NPIPB3Q92617 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPB3Q92617 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
NPIPB3Q92617 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPB3Q92617 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB3Q92617 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 TSPY17P-201ENST00000450329 467 ntBASIC14.27□□□□□ -0.13
NPIPB3Q92617 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB3Q92617 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 AC009065.1-201ENST00000564055 1225 ntBASIC14.27□□□□□ -0.13
NPIPB3Q92617 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB3Q92617 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB3Q92617 AP005242.2-201ENST00000580065 1175 ntBASIC14.27□□□□□ -0.13
NPIPB3Q92617 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPB3Q92617 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB3Q92617 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB3Q92617 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB3Q92617 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.27□□□□□ -0.13
NPIPB3Q92617 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 KRT18P55-202ENST00000578578 1546 ntBASIC14.26□□□□□ -0.13
NPIPB3Q92617 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 SLC25A1P2-201ENST00000430693 912 ntBASIC14.26□□□□□ -0.13
NPIPB3Q92617 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 AC098590.1-201ENST00000468126 897 ntBASIC14.26□□□□□ -0.13
NPIPB3Q92617 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 AL353719.1-201ENST00000566847 864 ntBASIC14.26□□□□□ -0.13
NPIPB3Q92617 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 AL023803.3-201ENST00000615559 522 ntBASIC14.26□□□□□ -0.13
NPIPB3Q92617 CR769767.2-201ENST00000622735 460 ntBASIC14.26□□□□□ -0.13
NPIPB3Q92617 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 AC106820.2-201ENST00000563775 3264 ntBASIC14.26□□□□□ -0.13
NPIPB3Q92617 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB3Q92617 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB3Q92617 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms