Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 FDX1P1-201ENST00000449115 551 ntBASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM3Q8TF72 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
SHROOM3Q8TF72 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHROOM3Q8TF72 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SHROOM3Q8TF72 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SHROOM3Q8TF72 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.39■□□□□ 0.54
SHROOM3Q8TF72 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 AP003733.1-201ENST00000491725 852 ntBASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 AL353692.3-201ENST00000407031 1396 ntBASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM3Q8TF72 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 IER3-202ENST00000376377 1350 ntBASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 REXO1L11P-201ENST00000620964 1927 ntBASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.38■□□□□ 0.53
SHROOM3Q8TF72 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM3Q8TF72 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms