Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 RPS2P55-201ENST00000397318 883 ntBASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 CROCCP2-202ENST00000412962 2773 ntBASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 AC107956.1-201ENST00000494359 873 ntBASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 AC124067.4-201ENST00000519691 2379 ntBASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 AP005242.2-201ENST00000580065 1175 ntBASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 AC012313.1-201ENST00000593393 3059 ntBASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4Y2Q8TD47 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 AC233702.5-201ENST00000584107 538 ntBASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4Y2Q8TD47 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 HLA-J-201ENST00000462773 1622 ntBASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms