Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 DUTP2-201ENST00000519164 463 ntBASIC19.38■□□□□ 0.69
BEST2Q8NFU1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 AC022898.2-201ENST00000616822 1312 ntBASIC19.38■□□□□ 0.69
BEST2Q8NFU1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 AC026396.1-201ENST00000419388 421 ntBASIC19.37■□□□□ 0.69
BEST2Q8NFU1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 AC111152.3-201ENST00000569699 673 ntBASIC19.37■□□□□ 0.69
BEST2Q8NFU1 RN7SL510P-201ENST00000581311 263 ntBASIC19.37■□□□□ 0.69
BEST2Q8NFU1 AC005336.2-201ENST00000593183 939 ntBASIC19.37■□□□□ 0.69
BEST2Q8NFU1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST2Q8NFU1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 AC091304.2-201ENST00000564639 760 ntBASIC19.36■□□□□ 0.69
BEST2Q8NFU1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.36■□□□□ 0.69
BEST2Q8NFU1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.36■□□□□ 0.69
BEST2Q8NFU1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 AC009113.1-201ENST00000570267 2443 ntBASIC19.35■□□□□ 0.69
BEST2Q8NFU1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 AC104581.1-202ENST00000635932 2618 ntBASIC19.35■□□□□ 0.69
BEST2Q8NFU1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 POM121L3P-201ENST00000419331 1163 ntBASIC19.35■□□□□ 0.69
BEST2Q8NFU1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms