Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 AC145285.6-201ENST00000604632 637 ntBASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00301Q8NCQ3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 AC141586.5-201ENST00000624546 2050 ntBASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00301Q8NCQ3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 AC087499.1-201ENST00000418141 1075 ntBASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 AC113404.2-201ENST00000507884 177 ntBASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00301Q8NCQ3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00301Q8NCQ3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
LINC00301Q8NCQ3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00301Q8NCQ3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00301Q8NCQ3 AC022898.2-201ENST00000616822 1312 ntBASIC20.52■□□□□ 0.87
LINC00301Q8NCQ3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms