Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 AC005829.1-201ENST00000570002 483 ntBASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 PGM5P2-202ENST00000637225 1043 ntBASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 AC097374.2-201ENST00000618617 1306 ntBASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A3Q8N4M1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC093484.2-201ENST00000580996 2166 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC073621.1-201ENST00000392730 636 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 MCCD1P2-201ENST00000423228 335 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC007967.3-201ENST00000434308 558 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 KRT18P2-201ENST00000447938 1258 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AL161938.1-201ENST00000569833 2180 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A3Q8N4M1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 PRYP5-201ENST00000451909 266 ntBASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 AC108751.1-201ENST00000490852 363 ntBASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 AC006557.2-201ENST00000592985 1240 ntBASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 PMPCAP1-201ENST00000508114 1576 ntBASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A3Q8N4M1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms