Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.45■□□□□ 0.54
SIX5Q8N196 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.45■□□□□ 0.54
SIX5Q8N196 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.45■□□□□ 0.54
SIX5Q8N196 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIX5Q8N196 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SIX5Q8N196 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 LINC01006-201ENST00000333319 2292 ntBASIC18.44■□□□□ 0.54
SIX5Q8N196 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SIX5Q8N196 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SIX5Q8N196 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 RFPL4AP1-201ENST00000530883 850 ntBASIC18.44■□□□□ 0.54
SIX5Q8N196 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.44■□□□□ 0.54
SIX5Q8N196 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.44■□□□□ 0.54
SIX5Q8N196 SNHG9-202ENST00000564014 471 ntBASIC18.44■□□□□ 0.54
SIX5Q8N196 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.44■□□□□ 0.54
SIX5Q8N196 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.44■□□□□ 0.54
SIX5Q8N196 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SIX5Q8N196 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 AC009102.3-201ENST00000623118 1491 ntBASIC18.44■□□□□ 0.54
SIX5Q8N196 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIX5Q8N196 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.44■□□□□ 0.54
SIX5Q8N196 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SIX5Q8N196 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SIX5Q8N196 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.43■□□□□ 0.54
SIX5Q8N196 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.43■□□□□ 0.54
SIX5Q8N196 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.43■□□□□ 0.54
SIX5Q8N196 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SIX5Q8N196 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.43■□□□□ 0.54
SIX5Q8N196 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.43■□□□□ 0.54
SIX5Q8N196 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SIX5Q8N196 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.43■□□□□ 0.54
SIX5Q8N196 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
SIX5Q8N196 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
SIX5Q8N196 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.43■□□□□ 0.54
SIX5Q8N196 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SIX5Q8N196 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SIX5Q8N196 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIX5Q8N196 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.42■□□□□ 0.54
SIX5Q8N196 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SIX5Q8N196 HCG11-201ENST00000411553 5696 ntBASIC18.42■□□□□ 0.54
SIX5Q8N196 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.42■□□□□ 0.54
SIX5Q8N196 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms