Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 LSM12-202ENST00000585388 942 ntTSL 3 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 USP39-202ENST00000409025 1946 ntTSL 5 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 AC132938.5-201ENST00000624980 1813 ntBASIC26.57■■□□□ 1.84
ABCA6Q8N139 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.57■■□□□ 1.84
ABCA6Q8N139 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA6Q8N139 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 WBP2-203ENST00000433525 928 ntTSL 2 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 CD63-210ENST00000550776 870 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 AC091812.2-201ENST00000619081 385 ntBASIC26.56■■□□□ 1.84
ABCA6Q8N139 AC004790.2-201ENST00000623588 572 ntBASIC26.56■■□□□ 1.84
ABCA6Q8N139 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 COBL-210ENST00000632460 1941 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA6Q8N139 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA6Q8N139 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA6Q8N139 AC093484.2-201ENST00000580996 2166 ntBASIC26.55■■□□□ 1.84
ABCA6Q8N139 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA6Q8N139 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 FAM58CP-201ENST00000435741 640 ntBASIC26.55■■□□□ 1.84
ABCA6Q8N139 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 CCDC74BP1-201ENST00000508880 1123 ntBASIC26.55■■□□□ 1.84
ABCA6Q8N139 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 METTL23-205ENST00000588302 925 ntTSL 5 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA6Q8N139 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA6Q8N139 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA6Q8N139 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA6Q8N139 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA6Q8N139 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC26.55■■□□□ 1.84
ABCA6Q8N139 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 MRPL20P1-201ENST00000400819 433 ntBASIC26.54■■□□□ 1.84
ABCA6Q8N139 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 AL020989.1-201ENST00000422979 469 ntBASIC26.54■■□□□ 1.84
ABCA6Q8N139 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC26.54■■□□□ 1.84
ABCA6Q8N139 AL513210.1-201ENST00000629608 234 ntBASIC26.54■■□□□ 1.84
ABCA6Q8N139 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA6Q8N139 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms