Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 AC011558.1-201ENST00000623459 338 ntBASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE9Q8IYJ1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 SPDYE15P-201ENST00000424157 909 ntBASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 BX664615.1-201ENST00000443558 458 ntBASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 RASA4DP-201ENST00000460726 1199 ntBASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 YBX1P2-201ENST00000489612 999 ntBASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 LINC01023-201ENST00000606054 436 ntBASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE9Q8IYJ1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 AC117947.1-201ENST00000427448 529 ntBASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 AL031432.5-201ENST00000641059 760 ntBASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE9Q8IYJ1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms